recipe bioconductor-hicdatalymphoblast

Human lymphoblastoid HiC data from Lieberman-Aiden et al. 2009

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/HiCDataLymphoblast.html

License:

GPL-3

Recipe:

/bioconductor-hicdatalymphoblast/meta.yaml

The HiC data from human lymphoblastoid cell line (HindIII restriction) was retrieved from the sequence read archive and two ends of the paired reads were aligned separately with bowtie.

package bioconductor-hicdatalymphoblast

(downloads) docker_bioconductor-hicdatalymphoblast

Versions:
1.33.0-0,  1.30.0-1,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.25.1-0,  1.24.0-0,  1.22.0-0, 

1.33.0-0,  1.30.0-1,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.25.1-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.20.0-0,  1.18.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-hicdatalymphoblast

and update with:

conda update bioconductor-hicdatalymphoblast

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-hicdatalymphoblast:<tag>

(see bioconductor-hicdatalymphoblast/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-hicdatalymphoblast/README.html)