recipe bioconductor-hicdatalymphoblast

Human lymphoblastoid HiC data from Lieberman-Aiden et al. 2009

Homepage

https://bioconductor.org/packages/3.11/data/experiment/html/HiCDataLymphoblast.html

License

GPL-3

Recipe

/bioconductor-hicdatalymphoblast/meta.yaml

The HiC data from human lymphoblastoid cell line (HindIII restriction) was retrieved from the sequence read archive and two ends of the paired reads were aligned separately with bowtie.

package bioconductor-hicdatalymphoblast

(downloads) docker_bioconductor-hicdatalymphoblast

Versions

1.24.0-01.22.0-01.20.0-11.20.0-01.18.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-hicdatalymphoblast

and update with:

conda update bioconductor-hicdatalymphoblast

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-hicdatalymphoblast:<tag>

(see bioconductor-hicdatalymphoblast/tags for valid values for <tag>)