recipe bioconductor-huexexonprobesetlocationhg18

Exon-level probeset chromosome location for microarrays of type HuEx

Homepage:

https://bioconductor.org/packages/3.18/data/annotation/html/HuExExonProbesetLocationHg18.html

License:

LGPL

Recipe:

/bioconductor-huexexonprobesetlocationhg18/meta.yaml

This package was automatically created by package AnnotationDbi version 1.8.0. The exon-level probeset genome location was retrieved from Netaffx using AffyCompatible. The exon-level probeset genome location was retrieved from Netaffx using AffyCompatible. Genome release hg18.

package bioconductor-huexexonprobesetlocationhg18

(downloads) docker_bioconductor-huexexonprobesetlocationhg18

versions:
0.0.2-12,  0.0.2-11,  0.0.2-10,  0.0.2-9,  0.0.2-8,  0.0.2-7,  0.0.2-6,  0.0.2-5,  0.0.2-4, 

0.0.2-12,  0.0.2-11,  0.0.2-10,  0.0.2-9,  0.0.2-8,  0.0.2-7,  0.0.2-6,  0.0.2-5,  0.0.2-4,  0.0.2-3,  0.0.2-2,  0.0.2-0

depends bioconductor-annotationdbi:

>=1.64.0,<1.65.0

depends bioconductor-data-packages:

>=20231203

depends curl:

depends r-base:

>=4.3,<4.4.0a0

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-huexexonprobesetlocationhg18

and update with::

   mamba update bioconductor-huexexonprobesetlocationhg18

To create a new environment, run:

mamba create --name myenvname bioconductor-huexexonprobesetlocationhg18

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/bioconductor-huexexonprobesetlocationhg18:<tag>

(see `bioconductor-huexexonprobesetlocationhg18/tags`_ for valid values for ``<tag>``)

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