Package Recipe 'bioconductor-humanaffydata'

recipe bioconductor-humanaffydata

GEO accession GSE64985 and ArrayExpress accession E-MTAB-62 as ExpressionSet objects

Homepage:: https://bioconductor.org/packages/3.16/data/experiment/html/HumanAffyData.html
License:: Artistic-2.0
Recipe:: /bioconductor-humanaffydata/meta.yaml

Re-analysis of human gene expression data generated on the Affymetrix HG U133PlusV2 (EH176) and Affymetrix HG U133A (EH177) platforms. The original data were normalized using robust multiarray averaging (RMA) to obtain an integrated gene expression atlas across diverse biological sample types and conditions. The entire compendia comprisee 9395 arrays for EH176 and 5372 arrays for EH177.

package bioconductor-humanaffydata¶

Versions:

1.24.0-0, 1.20.0-1, 1.20.0-0, 1.18.0-0, 1.16.0-1, 1.16.0-0, 1.14.0-0, 1.12.0-0, 1.10.0-1,

1.24.0-0, 1.20.0-1, 1.20.0-0, 1.18.0-0, 1.16.0-1, 1.16.0-0, 1.14.0-0, 1.12.0-0, 1.10.0-1, 1.8.0-0

Depends:

bioconductor-biobase >=2.58.0,<2.59.0
bioconductor-data-packages >=20221109
bioconductor-experimenthub >=2.6.0,<2.7.0
curl
r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-humanaffydata

and update with:

conda update bioconductor-humanaffydata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-humanaffydata:<tag>

(see bioconductor-humanaffydata/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-humanaffydata/README.html)