recipe bioconductor-ibh

Interaction Based Homogeneity for Evaluating Gene Lists

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/ibh.html

License:

GPL (>= 2)

Recipe:

/bioconductor-ibh/meta.yaml

Links:

biotools: ibh, doi: 10.1038/nmeth.3252

This package contains methods for calculating Interaction Based Homogeneity to evaluate fitness of gene lists to an interaction network which is useful for evaluation of clustering results and gene list analysis. BioGRID interactions are used in the calculation. The user can also provide their own interactions.

package bioconductor-ibh

(downloads) docker_bioconductor-ibh

Versions:
1.46.0-0,  1.42.0-0,  1.40.0-0,  1.38.0-2,  1.38.0-0,  1.36.0-0,  1.34.0-1,  1.32.0-1,  1.32.0-0, 

1.46.0-0,  1.42.0-0,  1.40.0-0,  1.38.0-2,  1.38.0-0,  1.36.0-0,  1.34.0-1,  1.32.0-1,  1.32.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-ibh

and update with:

conda update bioconductor-ibh

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ibh:<tag>

(see bioconductor-ibh/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-ibh/README.html)