recipe bioconductor-igvr

igvR: integrative genomics viewer

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/igvR.html

License:

MIT + file LICENSE

Recipe:

/bioconductor-igvr/meta.yaml

Access to igv.js, the Integrative Genomics Viewer running in a web browser.

package bioconductor-igvr

Versions:

1.18.0-0,  1.14.0-0,  1.10.0-1,  1.10.0-0,  1.7.8-0,  1.6.1-0,  1.4.0-1,  1.2.0-0

Depends:

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-browserviz >=2.20.0,<2.21.0

• bioconductor-genomicalignments >=1.34.0,<1.35.0

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-rtracklayer >=1.58.0,<1.59.0

• bioconductor-variantannotation >=1.44.0,<1.45.0

• r-base >=4.2,<4.3.0a0

• r-httpuv

• r-httr

• r-rcolorbrewer

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-igvr

and update with:

conda update bioconductor-igvr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-igvr:<tag>

(see bioconductor-igvr/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-igvr/README.html)