recipe bioconductor-impute

impute: Imputation for microarray data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/impute.html

License:

GPL-2

Recipe:

/bioconductor-impute/meta.yaml

Links:

biotools: impute, doi: 10.1007/978-3-642-57489-4_7

Imputation for microarray data (currently KNN only)

package bioconductor-impute

Versions:

1.72.0-0,  1.68.0-2,  1.68.0-1,  1.68.0-0,  1.66.0-0,  1.64.0-1,  1.64.0-0,  1.62.0-0,  1.60.0-0, 

1.72.0-0,  1.68.0-2,  1.68.0-1,  1.68.0-0,  1.66.0-0,  1.64.0-1,  1.64.0-0,  1.62.0-0,  1.60.0-0,  1.58.0-1,  1.58.0-0,  1.56.0-0,  1.54.0-0,  1.52.0-0,  1.50.1-0,  1.46.0-1,  1.46.0-0,  1.44.0-0

Depends:

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• libgfortran-ng

• libgfortran5 >=10.4.0

• liblapack >=3.9.0,<4.0a0

• r-base >=4.2,<4.3.0a0

Required By:

• bioconductor-cola

• bioconductor-methylclock

• bioconductor-geoexplorer

• bioconductor-pigengene

• bioconductor-poma

• bioconductor-genefu

• bioconductor-curatedbreastdata

• bioconductor-champ

• bioconductor-msnbase

• bioconductor-doppelgangr

• bioconductor-pmp

• bioconductor-metagxpancreas

• r-wgcna

• r-metaboanalyst

• bioconductor-rnaagecalc

• r-ic10

• bioconductor-cancersubtypes

• r-swamp

• bioconductor-genomation

• bioconductor-matrixqcvis

• r-imputelcmd

• bioconductor-tin

• bioconductor-epimix

• r-samr

• bioconductor-stattarget

• bioconductor-methylmix

• bioconductor-fastliquidassociation

• secimtools

• bioconductor-egad

• bioconductor-cghcall

• bioconductor-meat

• bioconductor-netboost

• bioconductor-metagxovarian

• bioconductor-magar

• bioconductor-mirlab

• bioconductor-biscuiteer

• bioconductor-amaretto

• bioconductor-dexma

• bioconductor-metagxbreast

• bioconductor-enmix

• r-speaq

• bioconductor-remp

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-impute

and update with:

conda update bioconductor-impute

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-impute:<tag>

(see bioconductor-impute/tags for valid values for <tag>)

Download stats

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