recipe bioconductor-intad

The package is focused on the detection of correlation between expressed genes and selected epigenomic signals i.e. enhancers obtained from ChIP-seq data within topologically associated domains (TADs). Various parameters can be controlled to investigate the influence of external factors and visualization plots are available for each analysis step.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/InTAD.html

License

GPL (>=2)

Recipe

/bioconductor-intad/meta.yaml

package bioconductor-intad

(downloads) docker_bioconductor-intad

Versions

1.2.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-intad

and update with:

conda update bioconductor-intad

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-intad:<tag>

(see bioconductor-intad/tags for valid values for <tag>)