recipe bioconductor-isee

Interactive SummarizedExperiment Explorer

Homepage

https://bioconductor.org/packages/3.11/bioc/html/iSEE.html

License

MIT + file LICENSE

Recipe

/bioconductor-isee/meta.yaml

Create an interactive Shiny-based graphical user interface for exploring data stored in SummarizedExperiment objects, including row- and column-level metadata. The interface supports transmission of selections between plots and tables, code tracking, interactive tours, interactive or programmatic initialization, preservation of app state, and extensibility to new panel types via S4 classes. Special attention is given to single-cell data in a SingleCellExperiment object with visualization of dimensionality reduction results.

package bioconductor-isee

(downloads) docker_bioconductor-isee

Versions

2.0.0-01.6.0-01.4.0-11.2.0-01.0.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-isee

and update with:

conda update bioconductor-isee

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-isee:<tag>

(see bioconductor-isee/tags for valid values for <tag>)