Package Recipe 'bioconductor-iseehub'

recipe bioconductor-iseehub

iSEE for the Bioconductor ExperimentHub

Homepage:: https://bioconductor.org/packages/3.16/bioc/html/iSEEhub.html
License:: Artistic-2.0
Recipe:: /bioconductor-iseehub/meta.yaml

This package defines a custom landing page for an iSEE app interfacing with the Bioconductor ExperimentHub. The landing page allows users to browse the ExperimentHub, select a data set, download and cache it, and import it directly into a Bioconductor iSEE app.

package bioconductor-iseehub¶

Versions:

1.0.0-0

Depends:

bioconductor-annotationhub >=3.6.0,<3.7.0
bioconductor-experimenthub >=2.6.0,<2.7.0
bioconductor-isee >=2.10.0,<2.11.0
bioconductor-s4vectors >=0.36.0,<0.37.0
bioconductor-singlecellexperiment >=1.20.0,<1.21.0
bioconductor-summarizedexperiment >=1.28.0,<1.29.0
r-base >=4.2,<4.3.0a0
r-biocmanager
r-dt
r-rintrojs
r-shiny
r-shinydashboard
r-shinyjs

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-iseehub

and update with:

conda update bioconductor-iseehub

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-iseehub:<tag>

(see bioconductor-iseehub/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-iseehub/README.html)