bioconductor-iseq

downloads

This package uses Bayesian hidden Ising models to identify IP-enriched genomic regions from ChIP-seq data. It can be used to analyze ChIP-seq data with and without controls and replicates.

Home http://bioconductor.org/packages/3.7/bioc/html/iSeq.html
Versions 1.32.0, 1.30.0
License GPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-iseq
Links biotools: iseq, doi: 10.1111/j.1541-0420.2009.01379.x

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-iseq

and update with:

conda update bioconductor-iseq

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-iseq.