recipe bioconductor-iseq

Bayesian hidden Ising models are implemented to identify IP-enriched genomic regions from ChIP-seq data. They can be used to analyze ChIP-seq data with and without controls and replicates.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/iSeq.html

License

GPL (>= 2)

Recipe

/bioconductor-iseq/meta.yaml

Links

biotools: iseq, doi: 10.1111/j.1541-0420.2009.01379.x

package bioconductor-iseq

(downloads) docker_bioconductor-iseq

Versions

1.36.0-0, 1.34.0-0, 1.32.0-0, 1.30.0-0

Depends libgcc-ng

>=7.3.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-iseq

and update with:

conda update bioconductor-iseq

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-iseq:<tag>

(see bioconductor-iseq/tags for valid values for <tag>)