recipe bioconductor-iyer517

exprSets for Iyer, Eisen et all 1999 Science paper

Homepage:

https://bioconductor.org/packages/3.18/data/experiment/html/Iyer517.html

License:

Artistic-2.0

Recipe:

/bioconductor-iyer517/meta.yaml

representation of public Iyer data from http://genome-www.stanford.edu/serum/clusters.html

package bioconductor-iyer517

versions:

1.44.0-0,  1.42.0-0,  1.40.0-0,  1.36.0-1,  1.36.0-0,  1.34.0-0,  1.32.0-1,  1.32.0-0,  1.31.0-0, 

1.44.0-0,  1.42.0-0,  1.40.0-0,  1.36.0-1,  1.36.0-0,  1.34.0-0,  1.32.0-1,  1.32.0-0,  1.31.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.24.0-0

depends bioconductor-biobase:

>=2.62.0,<2.63.0

depends bioconductor-data-packages:

>=20231203

depends curl:

depends r-base:

>=4.3,<4.4.0a0

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-iyer517

and update with::

   mamba update bioconductor-iyer517

To create a new environment, run:

mamba create --name myenvname bioconductor-iyer517

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/bioconductor-iyer517:<tag>

(see `bioconductor-iyer517/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-iyer517/README.html)