-
recipe
bioconductor-kegglincs¶ See what is going on ‘under the hood’ of KEGG pathways by explicitly re-creating the pathway maps from information obtained from KGML files.
- Homepage
https://bioconductor.org/packages/3.9/bioc/html/KEGGlincs.html
- License
GPL-3
- Recipe
- Links
biotools: kegglincs, doi: 10.7490/f1000research.1113436.1
-
package
bioconductor-kegglincs¶ 
- Versions
1.8.0-0, 1.6.2-0, 1.4.0-0
- Depends bioconductor-annotationdbi
>=1.44.0,<1.45.0
- Depends bioconductor-hgu133a.db
>=3.2.0,<3.3.0
- Depends bioconductor-kegggraph
>=1.42.0,<1.43.0
- Depends bioconductor-keggrest
>=1.22.0,<1.23.0
- Depends bioconductor-kodata
>=1.8.0,<1.9.0
- Depends bioconductor-org.hs.eg.db
>=3.7.0,<3.8.0
- Depends r-base
>=3.5.1,<3.5.2.0a0
- Depends r-gtools
- Depends r-httr
- Depends r-igraph
- Depends r-plyr
- Depends r-rjsonio
- Depends r-xml
- Requirements
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-kegglincs
and update with:
conda update bioconductor-kegglincs
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-kegglincs:<tag>
(see bioconductor-kegglincs/tags for valid values for
<tag>)
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-kegglincs/README.html)