recipe bioconductor-keggorthology

graph support for KO, KEGG Orthology

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/keggorthology.html

License:

Artistic-2.0

Recipe:

/bioconductor-keggorthology/meta.yaml

Links:

biotools: keggorthology, doi: 10.1038/nmeth.3252

graphical representation of the Feb 2010 KEGG Orthology. The KEGG orthology is a set of pathway IDs that are not to be confused with the KEGG ortholog IDs.

package bioconductor-keggorthology

Versions:

2.50.0-0,  2.46.0-0,  2.44.0-0,  2.42.0-1,  2.42.0-0,  2.40.0-0,  2.38.0-0,  2.36.0-1,  2.34.0-0, 

2.50.0-0,  2.46.0-0,  2.44.0-0,  2.42.0-1,  2.42.0-0,  2.40.0-0,  2.38.0-0,  2.36.0-1,  2.34.0-0,  2.32.0-0,  2.30.0-0

Depends:

• bioconductor-annotationdbi >=1.60.0,<1.61.0

• bioconductor-graph >=1.76.0,<1.77.0

• bioconductor-hgu95av2.db >=3.13.0,<3.14.0

• r-base >=4.2,<4.3.0a0

• r-dbi

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-keggorthology

and update with:

conda update bioconductor-keggorthology

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-keggorthology:<tag>

(see bioconductor-keggorthology/tags for valid values for <tag>)

Download stats

Link to this page

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[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-keggorthology/README.html)