recipe bioconductor-macrophage

Human macrophage immune response

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/macrophage.html

License:

GPL (>= 2)

Recipe:

/bioconductor-macrophage/meta.yaml

This package provides the output of running Salmon on a set of 24 RNA-seq samples from Alasoo, et al. "Shared genetic effects on chromatin and gene expression indicate a role for enhancer priming in immune response", published in Nature Genetics, January 2018. For details on version numbers and how the samples were processed see the package vignette.

package bioconductor-macrophage

(downloads) docker_bioconductor-macrophage

Versions:
1.13.0-0,  1.10.0-1,  1.10.0-0,  1.8.0-0,  1.6.0-1,  1.6.0-0,  1.5.0-0,  1.4.0-0,  1.2.0-0, 

1.13.0-0,  1.10.0-1,  1.10.0-0,  1.8.0-0,  1.6.0-1,  1.6.0-0,  1.5.0-0,  1.4.0-0,  1.2.0-0,  1.0.0-1,  1.0.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-macrophage

and update with:

conda update bioconductor-macrophage

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-macrophage:<tag>

(see bioconductor-macrophage/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-macrophage/README.html)