- recipe bioconductor-macrophage
Human macrophage immune response
- Homepage:
https://bioconductor.org/packages/3.16/data/experiment/html/macrophage.html
- License:
GPL (>= 2)
- Recipe:
This package provides the output of running Salmon on a set of 24 RNA-seq samples from Alasoo, et al. "Shared genetic effects on chromatin and gene expression indicate a role for enhancer priming in immune response", published in Nature Genetics, January 2018. For details on version numbers and how the samples were processed see the package vignette.
- package bioconductor-macrophage¶
-
- Versions:
1.13.0-0
,1.10.0-1
,1.10.0-0
,1.8.0-0
,1.6.0-1
,1.6.0-0
,1.5.0-0
,1.4.0-0
,1.2.0-0
,1.13.0-0
,1.10.0-1
,1.10.0-0
,1.8.0-0
,1.6.0-1
,1.6.0-0
,1.5.0-0
,1.4.0-0
,1.2.0-0
,1.0.0-1
,1.0.0-0
- Depends:
bioconductor-data-packages
>=20221103
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-macrophage
and update with:
conda update bioconductor-macrophage
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-macrophage:<tag>
(see bioconductor-macrophage/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-macrophage/README.html)