- recipe bioconductor-macsdata
Test datasets for the MACSr package
Test datasets from the MACS3 test examples are use in the examples of the `MACSr` package. All 9 datasets are uploaded to the `ExperimentHub`. The original data can be found at: https://github.com/macs3-project/MACS/.
- package bioconductor-macsdata¶
While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.
Given that you already have a conda environment in which you want to have this package, install with:
mamba install bioconductor-macsdata and update with:: mamba update bioconductor-macsdata
To create a new environment, run:
mamba create --name myenvname bioconductor-macsdata
myenvnamebeing a reasonable name for the environment (see e.g. the mamba docs for details and further options).
Alternatively, use the docker container:
docker pull quay.io/biocontainers/bioconductor-macsdata:<tag> (see `bioconductor-macsdata/tags`_ for valid values for ``<tag>``)