Package Recipe 'bioconductor-makecdfenv'

recipe bioconductor-makecdfenv¶

This package has two functions. One reads a Affymetrix chip description file (CDF) and creates a hash table environment containing the location/probe set membership mapping. The other creates a package that automatically loads that environment.

Homepage: https://bioconductor.org/packages/3.9/bioc/html/makecdfenv.html
License: GPL (>= 2)
Recipe: /bioconductor-makecdfenv/meta.yaml
Links: biotools: makecdfenv, doi: 10.1186/1471-2105-13-56

package bioconductor-makecdfenv¶

Versions: 1.58.0-0, 1.56.0-0, 1.54.0-0, 1.52.0-0
Depends bioconductor-affy: >=1.60.0,<1.61.0
Depends bioconductor-affyio: >=1.52.0,<1.53.0
Depends bioconductor-biobase: >=2.42.0,<2.43.0
Depends bioconductor-zlibbioc: >=1.28.0,<1.29.0
Depends libgcc-ng: >=7.3.0
Depends r-base: >=3.5.1,<3.5.2.0a0
Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-makecdfenv

and update with:

conda update bioconductor-makecdfenv

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-makecdfenv:<tag>

(see bioconductor-makecdfenv/tags for valid values for <tag>)

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-makecdfenv/README.html)