recipe bioconductor-marray

Exploratory analysis for two-color spotted microarray data

Homepage

https://bioconductor.org/packages/3.11/bioc/html/marray.html

License

LGPL

Recipe

/bioconductor-marray/meta.yaml

Links

biotools: marray, doi: 10.1007/0-387-21679-0_3

Class definitions for two-color spotted microarray data. Fuctions for data input, diagnostic plots, normalization and quality checking.

package bioconductor-marray

Versions

1.66.0-0,  1.64.0-0,  1.62.0-1,  1.62.0-0,  1.60.0-1,  1.60.0-0,  1.58.0-0,  1.56.0-0,  1.54.0-0, 

1.66.0-0,  1.64.0-0,  1.62.0-1,  1.62.0-0,  1.60.0-1,  1.60.0-0,  1.58.0-0,  1.56.0-0,  1.54.0-0,  1.50.0-1,  1.50.0-0

Depends

• bioconductor-limma >=3.44.0,<3.45.0

• r-base >=4.0,<4.1.0a0

Required By

• bioconductor-dyebias

• bioconductor-cghbase

• bioconductor-fem

• bioconductor-msstats

• bioconductor-convert

• bioconductor-sigar

• bioconductor-olingui

• bioconductor-plrs

• bioconductor-arrayquality

• bioconductor-turbonorm

• bioconductor-timecourse

• bioconductor-beta7

• bioconductor-piano

• bioconductor-maigespack

• bioconductor-methylpipe

• bioconductor-dyebiasexamples

• bioconductor-mineica

• bioconductor-olin

• bioconductor-stepnorm

• bioconductor-champ

• bioconductor-nnnorm

• bioconductor-rbm

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-marray

and update with:

conda update bioconductor-marray

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-marray:<tag>

(see bioconductor-marray/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-marray/README.html)