recipe bioconductor-marray

Exploratory analysis for two-color spotted microarray data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/marray.html

License:

LGPL

Recipe:

/bioconductor-marray/meta.yaml

Links:

biotools: marray, doi: 10.1007/0-387-21679-0_3

Class definitions for two-color spotted microarray data. Fuctions for data input, diagnostic plots, normalization and quality checking.

package bioconductor-marray

Versions:

1.76.0-0,  1.72.0-0,  1.70.0-0,  1.68.0-1,  1.68.0-0,  1.66.0-0,  1.64.0-0,  1.62.0-1,  1.62.0-0, 

1.76.0-0,  1.72.0-0,  1.70.0-0,  1.68.0-1,  1.68.0-0,  1.66.0-0,  1.64.0-0,  1.62.0-1,  1.62.0-0,  1.60.0-1,  1.60.0-0,  1.58.0-0,  1.56.0-0,  1.54.0-0,  1.50.0-1,  1.50.0-0

Depends:

• bioconductor-limma >=3.54.0,<3.55.0

• r-base >=4.2,<4.3.0a0

Required By:

• bioconductor-timecourse

• bioconductor-msstats

• bioconductor-dyebiasexamples

• bioconductor-mineica

• bioconductor-msstatsshiny

• bioconductor-nnnorm

• bioconductor-piano

• bioconductor-rbm

• bioconductor-beta7

• bioconductor-cghbase

• bioconductor-olin

• bioconductor-turbonorm

• bioconductor-champ

• bioconductor-olingui

• bioconductor-maigespack

• bioconductor-methylpipe

• bioconductor-arrayquality

• bioconductor-convert

• bioconductor-dyebias

• bioconductor-stepnorm

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-marray

and update with:

conda update bioconductor-marray

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-marray:<tag>

(see bioconductor-marray/tags for valid values for <tag>)

Download stats

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