recipe bioconductor-matter

A framework for rapid prototyping with file-based data structures

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/matter.html

License:

Artistic-2.0

Recipe:

/bioconductor-matter/meta.yaml

Links:

biotools: matter, doi: 10.1038/nmeth.3252

Memory-efficient reading, writing, and manipulation of structured binary data as file-based vectors, matrices, arrays, lists, and data frames.

package bioconductor-matter

Versions:

2.0.0-1,  2.0.0-0,  1.20.0-2,  1.20.0-1,  1.20.0-0,  1.18.0-0,  1.16.0-1,  1.16.0-0,  1.14.0-0, 

2.0.0-1,  2.0.0-0,  1.20.0-2,  1.20.0-1,  1.20.0-0,  1.18.0-0,  1.16.0-1,  1.16.0-0,  1.14.0-0,  1.12.0-0,  1.10.0-1,  1.8.3-0,  1.8.0-0,  1.6.0-1,  1.6.0-0,  1.4.1-0,  1.2.0-0

Depends:

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-biocparallel >=1.32.0,<1.33.0

• bioconductor-protgenerics >=1.30.0,<1.31.0

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• liblapack >=3.9.0,<4.0a0

• libstdcxx-ng >=12

• r-base >=4.2,<4.3.0a0

• r-biglm

• r-digest

• r-irlba

• r-matrix

Required By:

• bioconductor-cardinal

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-matter

and update with:

conda update bioconductor-matter

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-matter:<tag>

(see bioconductor-matter/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-matter/README.html)