bioconductor-mbamethyl

downloads

This package provides a function for reconstructing DNA methylation values from raw measurements. It iteratively implements the group fused lars to smooth related-by-location methylation values and the constrained least squares to remove probe affinity effect across multiple sequences.

Home http://bioconductor.org/packages/3.6/bioc/html/MBAmethyl.html
Versions 1.10.0, 1.12.0
License Artistic-2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-mbamethyl

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mbamethyl

and update with:

conda update bioconductor-mbamethyl

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-mbamethyl.