recipe bioconductor-mbamethyl

Model-based analysis of DNA methylation data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/MBAmethyl.html

License:

Artistic-2.0

Recipe:

/bioconductor-mbamethyl/meta.yaml

Links:

biotools: mbamethyl, doi: 10.1111/biom.12422

This package provides a function for reconstructing DNA methylation values from raw measurements. It iteratively implements the group fused lars to smooth related-by-location methylation values and the constrained least squares to remove probe affinity effect across multiple sequences.

package bioconductor-mbamethyl

(downloads) docker_bioconductor-mbamethyl

Versions:
1.32.0-01.28.0-01.26.0-01.24.0-11.24.0-01.22.0-01.20.0-01.18.0-11.18.0-0

1.32.0-01.28.0-01.26.0-01.24.0-11.24.0-01.22.0-01.20.0-01.18.0-11.18.0-01.16.0-01.14.0-01.12.0-01.10.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mbamethyl

and update with:

conda update bioconductor-mbamethyl

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mbamethyl:<tag>

(see bioconductor-mbamethyl/tags for valid values for <tag>)

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