recipe bioconductor-mbecs

Evaluation and correction of batch effects in microbiome data-sets

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/MBECS.html

License:

Artistic-2.0

Recipe:

/bioconductor-mbecs/meta.yaml

The Microbiome Batch Effect Correction Suite (MBECS) provides a set of functions to evaluate and mitigate unwated noise due to processing in batches. To that end it incorporates a host of batch correcting algorithms (BECA) from various packages. In addition it offers a correction and reporting pipeline that provides a preliminary look at the characteristics of a data-set before and after correcting for batch effects.

package bioconductor-mbecs

(downloads) docker_bioconductor-mbecs

Versions:

1.2.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mbecs

and update with:

conda update bioconductor-mbecs

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mbecs:<tag>

(see bioconductor-mbecs/tags for valid values for <tag>)

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