recipe bioconductor-mbomic

Integrative analysis of the microbiome and metabolome

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/mbOmic.html

License:

Artistic-2.0

Recipe:

/bioconductor-mbomic/meta.yaml

The mbOmic package contains a set of analysis functions for microbiomics and metabolomics data, designed to analyze the inter-omic correlation between microbiology and metabolites. Integrative analysis of the microbiome and metabolome is the aim of mbOmic. Additionally, the identification of enterotype using the gut microbiota abundance is preliminaryimplemented.

package bioconductor-mbomic

Versions:

1.2.0-0

Depends:

• r-base >=4.2,<4.3.0a0

• r-cluster

• r-clustersim

• r-data.table

• r-doparallel

• r-igraph

• r-psych

• r-visnetwork

• r-wgcna

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mbomic

and update with:

conda update bioconductor-mbomic

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mbomic:<tag>

(see bioconductor-mbomic/tags for valid values for <tag>)

Download stats

Link to this page

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