recipe bioconductor-mcsurvdata

Meta cohort survival data

Homepage

https://bioconductor.org/packages/3.14/data/experiment/html/mcsurvdata.html

License

GPL (>=2)

Recipe

/bioconductor-mcsurvdata/meta.yaml

This package stores two merged expressionSet objects that contain the gene expression profile and clinical information of -a- six breast cancer cohorts and -b- four colorectal cancer cohorts. Breast cancer data are employed in the vignette of the hrunbiased package for survival analysis of gene signatures.

package bioconductor-mcsurvdata

Versions

1.12.0-0,  1.10.0-0,  1.8.0-1,  1.8.0-0,  1.6.0-0,  1.4.0-0,  1.2.0-1,  1.0.0-1,  1.0.0-0

Depends

• bioconductor-annotationhub >=3.2.0,<3.3.0

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-experimenthub >=2.2.0,<2.3.0

• curl >=7.79.1,<8.0a0

• r-base >=4.1,<4.2.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mcsurvdata

and update with:

conda update bioconductor-mcsurvdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mcsurvdata:<tag>

(see bioconductor-mcsurvdata/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-mcsurvdata/README.html)