recipe bioconductor-mcsurvdata

Meta cohort survival data

Homepage

https://bioconductor.org/packages/3.11/data/experiment/html/mcsurvdata.html

License

GPL (>=2)

Recipe

/bioconductor-mcsurvdata/meta.yaml

This package stores two merged expressionSet objects that contain the gene expression profile and clinical information of -a- six breast cancer cohorts and -b- four colorectal cancer cohorts. Breast cancer data are employed in the vignette of the hrunbiased package for survival analysis of gene signatures.

package bioconductor-mcsurvdata

Versions

1.6.0-0,  1.4.0-0,  1.2.0-1,  1.0.0-1,  1.0.0-0

Depends

• bioconductor-annotationhub >=2.20.0,<2.21.0

• bioconductor-biobase >=2.48.0,<2.49.0

• bioconductor-experimenthub >=1.14.0,<1.15.0

• curl >=7.69.1,<8.0a0

• r-base >=4.0,<4.1.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mcsurvdata

and update with:

conda update bioconductor-mcsurvdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mcsurvdata:<tag>

(see bioconductor-mcsurvdata/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-mcsurvdata/README.html)