bioconductor-mergeomics

downloads

The Mergeomics pipeline serves as a flexible framework for integrating multidimensional omics-disease associations, functional genomics, canonical pathways and gene-gene interaction networks to generate mechanistic hypotheses. It includes two main parts, 1) Marker set enrichment analysis (MSEA); 2) Weighted Key Driver Analysis (wKDA).

Home http://bioconductor.org/packages/3.6/bioc/html/Mergeomics.html
Versions 1.4.0, 1.6.0
License GPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-mergeomics

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mergeomics

and update with:

conda update bioconductor-mergeomics

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-mergeomics.