recipe bioconductor-meshdbi

DBI to construct MeSH-related package from sqlite file

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/MeSHDbi.html

License:

Artistic-2.0

Recipe:

/bioconductor-meshdbi/meta.yaml

Links:

biotools: meshdbi

The package is unified implementation of MeSH.db, MeSH.AOR.db, and MeSH.PCR.db and also is interface to construct Gene-MeSH package (MeSH.XXX.eg.db). loadMeSHDbiPkg import sqlite file and generate MeSH.XXX.eg.db.

package bioconductor-meshdbi

Versions:

1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.18.0-0,  1.16.0-0, 

1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-0

Depends:

• bioconductor-annotationdbi >=1.56.0,<1.57.0

• bioconductor-biobase >=2.54.0,<2.55.0

• r-base >=4.1,<4.2.0a0

• r-rsqlite

Required By:

• bioconductor-meshr

• bioconductor-meshes

• bioconductor-sctensor

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-meshdbi

and update with:

conda update bioconductor-meshdbi

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-meshdbi:<tag>

(see bioconductor-meshdbi/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-meshdbi/README.html)