recipe bioconductor-meskit

A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic alterations

Homepage

https://bioconductor.org/packages/3.12/bioc/html/MesKit.html

License

MIT + file LICENSE

Recipe

/bioconductor-meskit/meta.yaml

MesKit provides commonly used analysis and visualization modules based on mutational data generated by multi-region sequencing (MRS). This package allows to decipher ITH, infer metastatic routes as well as uncover the underlying process of mutagenesis. Shiny application was also developed for a need of GUI-based analysis. As a handy tool, MesKit can facilitate the understanding of cancer cell evolution and its relevance to cancer therapeutics.

package bioconductor-meskit

(downloads) docker_bioconductor-meskit

Versions

0.99.16-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-meskit

and update with:

conda update bioconductor-meskit

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-meskit:<tag>

(see bioconductor-meskit/tags for valid values for <tag>)