recipe bioconductor-metapone

Conducts pathway test of metabolomics data using a weighted permutation test

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/metapone.html

License:

Artistic-2.0

Recipe:

/bioconductor-metapone/meta.yaml

The package conducts pathway testing from untargetted metabolomics data. It requires the user to supply feature-level test results, from case-control testing, regression, or other suitable feature-level tests for the study design. Weights are given to metabolic features based on how many metabolites they could potentially match to. The package can combine positive and negative mode results in pathway tests.

package bioconductor-metapone

(downloads) docker_bioconductor-metapone

Versions:

1.4.0-01.0.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-metapone

and update with:

conda update bioconductor-metapone

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-metapone:<tag>

(see bioconductor-metapone/tags for valid values for <tag>)

Download stats