- recipe bioconductor-metaseq
Meta-analysis of RNA-Seq count data in multiple studies
- Homepage:
https://bioconductor.org/packages/3.14/bioc/html/metaSeq.html
- License:
Artistic-2.0
- Recipe:
- Links:
biotools: metaseq, doi: 10.1038/nmeth.3252
The probabilities by one-sided NOISeq are combined by Fisher's method or Stouffer's method
- package bioconductor-metaseq¶
-
- Versions:
1.34.0-1
,1.34.0-0
,1.32.0-0
,1.30.0-1
,1.30.0-0
,1.28.0-0
,1.26.0-0
,1.24.0-1
,1.22.1-0
,1.34.0-1
,1.34.0-0
,1.32.0-0
,1.30.0-1
,1.30.0-0
,1.28.0-0
,1.26.0-0
,1.24.0-1
,1.22.1-0
,1.20.0-0
,1.18.0-0
,1.16.0-0
- Depends:
bioconductor-noiseq
>=2.38.0,<2.39.0
libblas
>=3.8.0,<4.0a0
libgcc-ng
>=10.3.0
liblapack
>=3.8.0,<4.0a0
libstdcxx-ng
>=10.3.0
r-base
>=4.1,<4.2.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-metaseq
and update with:
conda update bioconductor-metaseq
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-metaseq:<tag>
(see bioconductor-metaseq/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-metaseq/README.html)