recipe bioconductor-methylmnm

detect different methylation level (DMR)

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/methylMnM.html

License:

GPL-3

Recipe:

/bioconductor-methylmnm/meta.yaml

Links:

biotools: methylmnm, doi: 10.1101/gr.156539.113

To give the exactly p-value and q-value of MeDIP-seq and MRE-seq data for different samples comparation.

package bioconductor-methylmnm

Versions:

1.36.0-0,  1.32.0-2,  1.32.0-1,  1.32.0-0,  1.30.0-0,  1.28.0-1,  1.28.0-0,  1.26.0-0,  1.24.0-0, 

1.36.0-0,  1.32.0-2,  1.32.0-1,  1.32.0-0,  1.30.0-0,  1.28.0-1,  1.28.0-0,  1.26.0-0,  1.24.0-0,  1.22.0-1,  1.22.0-0,  1.20.0-0,  1.18.0-0,  1.16.0-0,  1.14.0-0

Depends:

• bioconductor-edger >=3.40.0,<3.41.0

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• liblapack >=3.9.0,<4.0a0

• r-base >=4.2,<4.3.0a0

• r-statmod

Required By:

• bioconductor-simd

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-methylmnm

and update with:

conda update bioconductor-methylmnm

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-methylmnm:<tag>

(see bioconductor-methylmnm/tags for valid values for <tag>)

Download stats

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