bioconductor-methylumi¶
This package provides classes for holding and manipulating Illumina methylation data. Based on eSet, it can contain MIAME information, sample information, feature information, and multiple matrices of data. An “intelligent” import function, methylumiR can read the Illumina text files and create a MethyLumiSet. methylumIDAT can directly read raw IDAT files from HumanMethylation27 and HumanMethylation450 microarrays. Normalization, background correction, and quality control features for GoldenGate, Infinium, and Infinium HD arrays are also included.
| Home | http://bioconductor.org/packages/3.6/bioc/html/methylumi.html |
| Versions | 2.22.0, 2.24.1 |
| License | GPL-2 |
| Recipe | https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-methylumi |
| Links | biotools: methylumi, doi: 10.1186/1471-2164-14-293 |
Installation¶
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-methylumi
and update with:
conda update bioconductor-methylumi
A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-methylumi.
Link to this page¶
Render an 
badge with the following Markdown:
[](http://bioconda.github.io/recipes/bioconductor-methylumi/README.html)
