recipe bioconductor-mgfr

Marker Gene Finder in RNA-seq data

Homepage

https://bioconductor.org/packages/3.11/bioc/html/MGFR.html

License

GPL-3

Recipe

/bioconductor-mgfr/meta.yaml

Links

biotools: mgfr, doi: 10.1186/s12864-015-1785-9

The package is designed to detect marker genes from RNA-seq data.

package bioconductor-mgfr

Versions

1.14.0-0,  1.12.0-0,  1.10.0-1,  1.8.0-0,  1.6.0-0,  1.4.0-0,  1.2.0-0

Depends

• bioconductor-annotate >=1.66.0,<1.67.0

• bioconductor-biomart >=2.44.0,<2.45.0

• r-base >=4.0,<4.1.0a0

Required By

• bioconductor-sampleclassifier

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mgfr

and update with:

conda update bioconductor-mgfr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mgfr:<tag>

(see bioconductor-mgfr/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-mgfr/README.html)