recipe bioconductor-mgfr

Marker Gene Finder in RNA-seq data

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/MGFR.html

License:

GPL-3

Recipe:

/bioconductor-mgfr/meta.yaml

Links:

biotools: mgfr, doi: 10.1186/s12864-015-1785-9

The package is designed to detect marker genes from RNA-seq data.

package bioconductor-mgfr

Versions:

1.20.0-0,  1.18.0-0,  1.16.0-1,  1.16.0-0,  1.14.0-0,  1.12.0-0,  1.10.0-1,  1.8.0-0,  1.6.0-0, 

1.20.0-0,  1.18.0-0,  1.16.0-1,  1.16.0-0,  1.14.0-0,  1.12.0-0,  1.10.0-1,  1.8.0-0,  1.6.0-0,  1.4.0-0,  1.2.0-0

Depends:

• bioconductor-annotate >=1.72.0,<1.73.0

• bioconductor-biomart >=2.50.0,<2.51.0

• r-base >=4.1,<4.2.0a0

Required By:

• bioconductor-sampleclassifier

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mgfr

and update with:

conda update bioconductor-mgfr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mgfr:<tag>

(see bioconductor-mgfr/tags for valid values for <tag>)

Download stats

Link to this page

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[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-mgfr/README.html)