recipe bioconductor-michip

MiChip Parsing and Summarizing Functions

Homepage

https://bioconductor.org/packages/3.11/bioc/html/MiChip.html

License

GPL (>= 2)

Recipe

/bioconductor-michip/meta.yaml

Links

biotools: michip, doi: 10.1038/nmeth.3252

This package takes the MiChip miRNA microarray .grp scanner output files and parses these out, providing summary and plotting functions to analyse MiChip hybridizations. A set of hybridizations is packaged into an ExpressionSet allowing it to be used by other BioConductor packages.

package bioconductor-michip

(downloads) docker_bioconductor-michip

Versions

1.42.0-0,  1.40.0-0,  1.38.0-1,  1.36.0-0,  1.34.0-0,  1.32.0-0,  1.30.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-michip

and update with:

conda update bioconductor-michip

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-michip:<tag>

(see bioconductor-michip/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-michip/README.html)