- recipe bioconductor-michip
MiChip Parsing and Summarizing Functions
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/MiChip.html
- License
GPL (>= 2)
- Recipe
- Links
biotools: michip, doi: 10.1038/nmeth.3252
This package takes the MiChip miRNA microarray .grp scanner output files and parses these out, providing summary and plotting functions to analyse MiChip hybridizations. A set of hybridizations is packaged into an ExpressionSet allowing it to be used by other BioConductor packages.
- package bioconductor-michip¶
-
- Versions
1.48.0-0
,1.46.0-0
,1.44.0-1
,1.44.0-0
,1.42.0-0
,1.40.0-0
,1.38.0-1
,1.36.0-0
,1.34.0-0
,1.48.0-0
,1.46.0-0
,1.44.0-1
,1.44.0-0
,1.42.0-0
,1.40.0-0
,1.38.0-1
,1.36.0-0
,1.34.0-0
,1.32.0-0
,1.30.0-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-michip
and update with:
conda update bioconductor-michip
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-michip:<tag>
(see bioconductor-michip/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-michip/README.html)