recipe bioconductor-mircomp

Tools to assess and compare miRNA expression estimatation methods

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/miRcomp.html

License:

GPL-3 | file LICENSE

Recipe:

/bioconductor-mircomp/meta.yaml

Based on a large miRNA dilution study, this package provides tools to read in the raw amplification data and use these data to assess the performance of methods that estimate expression from the amplification curves.

package bioconductor-mircomp

Versions:

1.28.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.20.0-0,  1.18.0-0,  1.16.0-1,  1.14.0-1,  1.12.0-0

Depends:

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-mircompdata >=1.28.0,<1.29.0

• r-base >=4.2,<4.3.0a0

• r-kernsmooth

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mircomp

and update with:

conda update bioconductor-mircomp

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mircomp:<tag>

(see bioconductor-mircomp/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-mircomp/README.html)