recipe bioconductor-mircompdata

Data used in the miRcomp package



GPL-3 | file LICENSE



Raw amplification data from a large microRNA mixture / dilution study. These data are used by the miRcomp package to assess the performance of methods that estimate expression from the amplification curves.

package bioconductor-mircompdata

(downloads) docker_bioconductor-mircompdata



depends bioconductor-data-packages:


depends curl:

depends r-base:




You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-mircompdata

and update with::

   mamba update bioconductor-mircompdata

To create a new environment, run:

mamba create --name myenvname bioconductor-mircompdata

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `bioconductor-mircompdata/tags`_ for valid values for ``<tag>``)

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