recipe bioconductor-mmuphin

Meta-analysis Methods with Uniform Pipeline for Heterogeneity in Microbiome Studies

Homepage

https://bioconductor.org/packages/3.11/bioc/html/MMUPHin.html

License

MIT + file LICENSE

Recipe

/bioconductor-mmuphin/meta.yaml

MMUPHin is an R package for meta-analysis tasks of microbiome cohorts. It has function interfaces for: a) covariate-controlled batch- and cohort effect adjustment, b) meta-analysis differential abundance testing, c) meta-analysis unsupervised discrete structure (clustering) discovery, and d) meta-analysis unsupervised continuous structure discovery.

package bioconductor-mmuphin

(downloads) docker_bioconductor-mmuphin

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mmuphin

and update with:

conda update bioconductor-mmuphin

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mmuphin:<tag>

(see bioconductor-mmuphin/tags for valid values for <tag>)