recipe bioconductor-mobilitytransformr

Effective mobility scale transformation of CE-MS(/MS) data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/MobilityTransformR.html

License:

Artistic-2.0

Recipe:

/bioconductor-mobilitytransformr/meta.yaml

MobilityTransformR collects a tool set for effective mobility scale transformation of CE-MS/MS data in order to increase reproducibility. It provides functionality to determine the migration times from mobility markers that have been added to the analysis and performs the transformation based on these markers. MobilityTransformR supports the conversion of numeric vectors, Spectra-objects, and MSnOnDiskExp.

package bioconductor-mobilitytransformr

Versions:

1.2.0-0

Depends:

• bioconductor-metabocoreutils >=1.6.0,<1.7.0

• bioconductor-msnbase >=2.24.0,<2.25.0

• bioconductor-spectra >=1.8.0,<1.9.0

• bioconductor-xcms >=3.20.0,<3.21.0

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mobilitytransformr

and update with:

conda update bioconductor-mobilitytransformr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mobilitytransformr:<tag>

(see bioconductor-mobilitytransformr/tags for valid values for <tag>)

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