recipe bioconductor-mousegastrulationdata

Single-Cell -omics Data across Mouse Gastrulation and Early Organogenesis

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/MouseGastrulationData.html

License:

GPL-3

Recipe:

/bioconductor-mousegastrulationdata/meta.yaml

Provides processed and raw count data for single-cell RNA sequencing, single-cell ATAC-seq, and seqFISH (spatial transcriptomic) experiments performed along a timecourse of mouse gastrulation and early organogenesis.

package bioconductor-mousegastrulationdata

Versions:

1.12.0-0,  1.8.0-1,  1.8.0-0,  1.6.0-0,  1.4.0-1,  1.4.0-0,  1.2.0-0,  1.0.0-0

Depends:

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-bumpymatrix >=1.6.0,<1.7.0

• bioconductor-data-packages >=20221108

• bioconductor-experimenthub >=2.6.0,<2.7.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• bioconductor-singlecellexperiment >=1.20.0,<1.21.0

• bioconductor-spatialexperiment >=1.8.0,<1.9.0

• bioconductor-summarizedexperiment >=1.28.0,<1.29.0

• curl

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mousegastrulationdata

and update with:

conda update bioconductor-mousegastrulationdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mousegastrulationdata:<tag>

(see bioconductor-mousegastrulationdata/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-mousegastrulationdata/README.html)