recipe bioconductor-mpfe

Estimation of the amplicon methylation pattern distribution from bisulphite sequencing data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/MPFE.html

License:

GPL (>= 3)

Recipe:

/bioconductor-mpfe/meta.yaml

Links:

biotools: mpfe, doi: 10.1186/s12859-015-0600-6

Estimate distribution of methylation patterns from a table of counts from a bisulphite sequencing experiment given a non-conversion rate and read error rate.

package bioconductor-mpfe

(downloads) docker_bioconductor-mpfe

Versions:
1.34.0-01.30.0-01.28.0-01.26.0-11.26.0-01.23.0-01.22.0-01.20.0-11.20.0-0

1.34.0-01.30.0-01.28.0-01.26.0-11.26.0-01.23.0-01.22.0-01.20.0-11.20.0-01.18.0-01.16.0-01.14.0-01.12.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mpfe

and update with:

conda update bioconductor-mpfe

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mpfe:<tag>

(see bioconductor-mpfe/tags for valid values for <tag>)

Download stats