bioconductor-mpfe

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Estimate distribution of methylation patterns from a table of counts from a bisulphite sequencing experiment given a non-conversion rate and read error rate.

Home http://bioconductor.org/packages/3.7/bioc/html/MPFE.html
Versions 1.12.0, 1.14.0, 1.16.0
License GPL (>= 3)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-mpfe
Links biotools: mpfe, doi: 10.1186/s12859-015-0600-6

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mpfe

and update with:

conda update bioconductor-mpfe

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-mpfe.