recipe bioconductor-msbackendmsp

Mass Spectrometry Data Backend for NIST msp Files

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/MsBackendMsp.html

License:

Artistic-2.0

Recipe:

/bioconductor-msbackendmsp/meta.yaml

Mass spectrometry (MS) data backend supporting import and handling of MS/MS spectra from NIST MSP Format (msp) files. Import of data from files with different MSP *flavours* is supported. Objects from this package add support for MSP files to Bioconductor's Spectra package. This package is thus not supposed to be used without the Spectra package that provides a complete infrastructure for MS data handling.

package bioconductor-msbackendmsp

Versions:

1.2.0-0

Depends:

• bioconductor-biocparallel >=1.32.0,<1.33.0

• bioconductor-iranges >=2.32.0,<2.33.0

• bioconductor-mscoreutils >=1.10.0,<1.11.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• bioconductor-spectra >=1.8.0,<1.9.0

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-msbackendmsp

and update with:

conda update bioconductor-msbackendmsp

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-msbackendmsp:<tag>

(see bioconductor-msbackendmsp/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-msbackendmsp/README.html)