recipe bioconductor-msd16s

Healthy and moderate to severe diarrhea 16S expression data

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/msd16s.html

License:

Artistic-2.0

Recipe:

/bioconductor-msd16s/meta.yaml

Gut 16S sequencing expression data from 992 healthy and moderate-to-severe diarrhetic samples used in 'Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition'.

package bioconductor-msd16s

Versions:

1.18.0-0,  1.14.0-1,  1.14.0-0,  1.12.0-0,  1.10.0-1,  1.10.0-0,  1.8.0-0,  1.6.0-0,  1.4.0-1, 

1.18.0-0,  1.14.0-1,  1.14.0-0,  1.12.0-0,  1.10.0-1,  1.10.0-0,  1.8.0-0,  1.6.0-0,  1.4.0-1,  1.2.0-0

Depends:

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-data-packages >=20221104

• bioconductor-metagenomeseq >=1.40.0,<1.41.0

• curl

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-msd16s

and update with:

conda update bioconductor-msd16s

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-msd16s:<tag>

(see bioconductor-msd16s/tags for valid values for <tag>)

Download stats

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