recipe bioconductor-msdata

Various Mass Spectrometry raw data example files

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/msdata.html

License:

GPL (>= 2)

Recipe:

/bioconductor-msdata/meta.yaml

Ion Trap positive ionization mode data in mzML file format. Subset from 500-850 m/z and 1190-1310 seconds, incl. MS2 and MS3, intensity threshold 100.000. Extracts from FTICR Apex III, m/z 400-450. Subset of UPLC - Bruker micrOTOFq data, both mzML and mz5. LC-MSMS and MRM files from proteomics experiments. PSI mzIdentML example files for various search engines.

package bioconductor-msdata

(downloads) docker_bioconductor-msdata

Versions:
0.37.0-0,  0.34.0-1,  0.34.0-0,  0.32.0-0,  0.30.0-0,  0.29.0-0,  0.28.0-0,  0.26.0-0,  0.24.1-0, 

0.37.0-0,  0.34.0-1,  0.34.0-0,  0.32.0-0,  0.30.0-0,  0.29.0-0,  0.28.0-0,  0.26.0-0,  0.24.1-0,  0.24.0-0,  0.22.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-msdata

and update with:

conda update bioconductor-msdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-msdata:<tag>

(see bioconductor-msdata/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-msdata/README.html)