recipe bioconductor-msdata

Various Mass Spectrometry raw data example files

Homepage

https://bioconductor.org/packages/3.11/data/experiment/html/msdata.html

License

GPL (>= 2)

Recipe

/bioconductor-msdata/meta.yaml

Ion Trap positive ionization mode data in mzData file format. Subset from 500-850 m/z and 1190-1310 seconds, incl. MS2 and MS3, intensity threshold 100.000. Extracts from FTICR Apex III, m/z 400-450. Subset of UPLC - Bruker micrOTOFq data, both mzData, mzML and mz5. LC-MSMS and MRM files from proteomics experiments. PSI mzIdentML example files for various search engines.

package bioconductor-msdata

(downloads) docker_bioconductor-msdata

Versions

0.28.0-0, 0.26.0-0, 0.24.1-0, 0.24.0-0, 0.22.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-msdata

and update with:

conda update bioconductor-msdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-msdata:<tag>

(see bioconductor-msdata/tags for valid values for <tag>)