-
recipe
bioconductor-msnbase¶ MSnbase provides infrastructure for manipulation, processing and visualisation of mass spectrometry and proteomics data, ranging from raw to quantitative and annotated data.
- Homepage
https://bioconductor.org/packages/3.9/bioc/html/MSnbase.html
- License
Artistic-2.0
- Recipe
- Links
biotools: msnbase
-
package
bioconductor-msnbase¶ 
- Versions
2.8.3-0, 2.8.2-0, 2.4.0-1, 2.4.0-0, 2.2.0-0
- Depends bioconductor-affy
>=1.60.0,<1.61.0
- Depends bioconductor-biobase
>=2.42.0,<2.43.0
- Depends bioconductor-biocgenerics
>=0.28.0,<0.29.0
- Depends bioconductor-biocparallel
>=1.16.0,<1.17.0
- Depends bioconductor-impute
>=1.56.0,<1.57.0
- Depends bioconductor-iranges
>=2.16.0,<2.17.0
- Depends bioconductor-mzid
>=1.20.0,<1.21.0
- Depends bioconductor-mzr
>=2.16.0,<2.17.0
- Depends bioconductor-pcamethods
>=1.74.0,<1.75.0
- Depends bioconductor-preprocesscore
>=1.44.0,<1.45.0
- Depends bioconductor-protgenerics
>=1.14.0,<1.15.0
- Depends bioconductor-s4vectors
>=0.20.0,<0.21.0
- Depends bioconductor-vsn
>=3.50.0,<3.51.0
- Depends libgcc-ng
>=7.3.0
- Depends libstdcxx-ng
>=7.3.0
- Depends r-base
>=3.5.1,<3.5.2.0a0
- Depends r-digest
- Depends r-ggplot2
- Depends r-lattice
- Depends r-maldiquant
>=1.16
- Depends r-mass
- Depends r-plyr
- Depends r-rcpp
- Depends r-scales
- Depends r-xml
- Requirements
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-msnbase
and update with:
conda update bioconductor-msnbase
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-msnbase:<tag>
(see bioconductor-msnbase/tags for valid values for
<tag>)
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-msnbase/README.html)