- recipe bioconductor-msnbase
Base Functions and Classes for Mass Spectrometry and Proteomics
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/MSnbase.html
- License:
Artistic-2.0
- Recipe:
- Links:
biotools: msnbase
MSnbase provides infrastructure for manipulation, processing and visualisation of mass spectrometry and proteomics data, ranging from raw to quantitative and annotated data.
- package bioconductor-msnbase¶
-
- Versions:
2.24.0-0
,2.20.4-1
,2.20.4-0
,2.20.0-0
,2.18.0-0
,2.16.1-0
,2.16.0-0
,2.14.1-0
,2.12.0-0
,2.24.0-0
,2.20.4-1
,2.20.4-0
,2.20.0-0
,2.18.0-0
,2.16.1-0
,2.16.0-0
,2.14.1-0
,2.12.0-0
,2.10.1-0
,2.8.3-0
,2.8.2-0
,2.4.0-1
,2.4.0-0
,2.2.0-0
- Depends:
bioconductor-affy
>=1.76.0,<1.77.0
bioconductor-biobase
>=2.58.0,<2.59.0
bioconductor-biocgenerics
>=0.44.0,<0.45.0
bioconductor-biocparallel
>=1.32.0,<1.33.0
bioconductor-impute
>=1.72.0,<1.73.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-mscoreutils
>=1.10.0,<1.11.0
bioconductor-mzid
>=1.36.0,<1.37.0
bioconductor-mzr
>=2.32.0,<2.33.0
bioconductor-pcamethods
>=1.90.0,<1.91.0
bioconductor-protgenerics
>=1.30.0,<1.31.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
bioconductor-vsn
>=3.66.0,<3.67.0
libblas
>=3.9.0,<4.0a0
libgcc-ng
>=12
liblapack
>=3.9.0,<4.0a0
libstdcxx-ng
>=12
r-base
>=4.2,<4.3.0a0
r-maldiquant
>=1.16
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-msnbase
and update with:
conda update bioconductor-msnbase
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-msnbase:<tag>
(see bioconductor-msnbase/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-msnbase/README.html)