recipe bioconductor-mtbls2

MetaboLights MTBLS2: Comparative LC/MS-based profiling of silver nitrate-treated Arabidopsis thaliana leaves of wild-type and cyp79B2 cyp79B3 double knockout plants. Böttcher et al. (2004)

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/mtbls2.html

License:

CC0

Recipe:

/bioconductor-mtbls2/meta.yaml

Indole-3-acetaldoxime (IAOx) represents an early intermediate of the biosynthesis of a variety of indolic secondary metabolites including the phytoanticipin indol-3-ylmethyl glucosinolate and the phytoalexin camalexin (3-thiazol-2'-yl-indole). Arabidopsis thaliana cyp79B2 cyp79B3 double knockout plants are completely impaired in the conversion of tryptophan to indole-3-acetaldoxime and do not accumulate IAOx-derived metabolites any longer. Consequently, comparative analysis of wild-type and cyp79B2 cyp79B3 plant lines has the potential to explore the complete range of IAOx-derived indolic secondary metabolites.

package bioconductor-mtbls2

(downloads) docker_bioconductor-mtbls2

Versions:
1.27.0-0,  1.24.0-1,  1.24.0-0,  1.22.0-0,  1.20.1-0,  1.19.0-0,  1.17.0-0,  1.16.0-0,  1.14.0-1, 

1.27.0-0,  1.24.0-1,  1.24.0-0,  1.22.0-0,  1.20.1-0,  1.19.0-0,  1.17.0-0,  1.16.0-0,  1.14.0-1,  1.14.0-0,  1.12.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mtbls2

and update with:

conda update bioconductor-mtbls2

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mtbls2:<tag>

(see bioconductor-mtbls2/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-mtbls2/README.html)