recipe bioconductor-ncdfflow

ncdfFlow: A package that provides HDF5 based storage for flow cytometry data.

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/ncdfFlow.html

License:

AGPL-3.0-only

Recipe:

/bioconductor-ncdfflow/meta.yaml

Links:

biotools: ncdfflow, doi: 10.1016/j.copbio.2012.09.003

Provides HDF5 storage based methods and functions for manipulation of flow cytometry data.

package bioconductor-ncdfflow

Versions:

2.44.0-0,  2.40.0-2,  2.40.0-1,  2.40.0-0,  2.38.0-0,  2.36.0-2,  2.36.0-1,  2.36.0-0,  2.34.0-0, 

2.44.0-0,  2.40.0-2,  2.40.0-1,  2.40.0-0,  2.38.0-0,  2.36.0-2,  2.36.0-1,  2.36.0-0,  2.34.0-0,  2.32.0-0,  2.30.1-0,  2.28.1-0,  2.28.0-0,  2.26.0-0,  2.24.0-1,  2.24.0-0,  2.22.2-0,  2.22.0-0

Depends:

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-flowcore >=2.10.0,<2.11.0

• bioconductor-rhdf5lib >=1.20.0,<1.21.0

• bioconductor-zlibbioc >=1.44.0,<1.45.0

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• liblapack >=3.9.0,<4.0a0

• libstdcxx-ng >=12

• r-base >=4.2,<4.3.0a0

• r-bh

• r-cpp11

Required By:

• bioconductor-ggcyto

• bioconductor-flowworkspace

• bioconductor-flowstats

• bioconductor-opencyto

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-ncdfflow

and update with:

conda update bioconductor-ncdfflow

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ncdfflow:<tag>

(see bioconductor-ncdfflow/tags for valid values for <tag>)

Download stats

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