bioconductor-ndexr

downloads

This package offers an interface to NDEx servers, e.g. the public server at http://ndexbio.org/. It can retrieve and save networks via the API. Networks are offered as RCX object and as igraph representation.

Home http://bioconductor.org/packages/3.6/bioc/html/ndexr.html
Versions 1.0.0
License BSD
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-ndexr

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ndexr

and update with:

conda update bioconductor-ndexr

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-ndexr.