Package Recipe 'bioconductor-nestlink'

recipe bioconductor-nestlink

NestLink an R data package to guide through Engineered Peptide Barcodes for In-Depth Analyzes of Binding Protein Ensembles

Homepage:: https://bioconductor.org/packages/3.16/data/experiment/html/NestLink.html
License:: GPL
Recipe:: /bioconductor-nestlink/meta.yaml

Provides next-generation sequencing (NGS) and mass spectrometry (MS) sample data, code snippets and replication material used for developing NestLink. The NestLink approach is a protein binder selection and identification technology able to biophysically characterize thousands of library members at once without handling individual clones at any stage of the process. Data were acquired on NGS and MS platforms at the Functional Genomics Center Zurich.

package bioconductor-nestlink¶

Versions:

1.14.0-0, 1.10.0-1, 1.10.0-0, 1.8.0-0, 1.6.0-1, 1.6.0-0, 1.4.0-0, 1.2.0-0, 1.0.0-1

Depends:

bioconductor-annotationhub >=3.6.0,<3.7.0
bioconductor-biostrings >=2.66.0,<2.67.0
bioconductor-data-packages >=20221108
bioconductor-experimenthub >=2.6.0,<2.7.0
bioconductor-shortread >=1.56.0,<1.57.0
curl
r-base >=4.2,<4.3.0a0
r-gplots >=3.0
r-protviz >=0.4

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-nestlink

and update with:

conda update bioconductor-nestlink

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-nestlink:<tag>

(see bioconductor-nestlink/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-nestlink/README.html)