recipe bioconductor-ompbam

C++ Library for OpenMP-based multi-threaded sequential profiling of Binary Alignment Map (BAM) files

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/ompBAM.html

License:

MIT + file LICENSE

Recipe:

/bioconductor-ompbam/meta.yaml

This packages provides C++ header files for developers wishing to create R packages that processes BAM files. ompBAM automates file access, memory management, and handling of multiple threads 'behind the scenes', so developers can focus on creating domain-specific functionality. The included vignette contains detailed documentation of this API, including quick-start instructions to create a new ompBAM-based package, and step-by-step explanation of the functionality behind the example packaged included within ompBAM.

package bioconductor-ompbam

(downloads) docker_bioconductor-ompbam

Versions:

1.2.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-ompbam

and update with:

conda update bioconductor-ompbam

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ompbam:<tag>

(see bioconductor-ompbam/tags for valid values for <tag>)

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