Package Recipe 'bioconductor-oncoscore'

recipe bioconductor-oncoscore¶

A tool to identify potentially oncogenic genes

Homepage: https://bioconductor.org/packages/3.11/bioc/html/OncoScore.html
License: file LICENSE
Recipe: /bioconductor-oncoscore/meta.yaml

OncoScore is a tool to measure the association of genes to cancer based on citation frequencies in biomedical literature. The score is evaluated from PubMed literature by dynamically updatable web queries.

package bioconductor-oncoscore¶

Versions

1.16.0-0, 1.14.0-0, 1.12.0-1, 1.10.0-0

Depends

bioconductor-biomart >=2.44.0,<2.45.0
r-base >=4.0,<4.1.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-oncoscore

and update with:

conda update bioconductor-oncoscore

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-oncoscore:<tag>

(see bioconductor-oncoscore/tags for valid values for <tag>)

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-oncoscore/README.html)