recipe bioconductor-org.sc.sgd.db

Genome wide annotation for Yeast

Homepage

https://bioconductor.org/packages/3.11/data/annotation/html/org.Sc.sgd.db.html

License

Artistic-2.0

Recipe

/bioconductor-org.sc.sgd.db/meta.yaml

Genome wide annotation for Yeast, primarily based on mapping using ORF identifiers from SGD.

package bioconductor-org.sc.sgd.db

Versions

3.11.1-0, 3.10.0-0, 3.8.2-1, 3.7.0-0, 3.6.0-0, 3.5.0-0

Depends

• bioconductor-annotationdbi >=1.50.0,<1.51.0

• curl >=7.69.1,<8.0a0

• r-base >=4.0,<4.1.0a0

Required By

• bioconductor-yeast2.db

• bioconductor-liquidassociation

• bioconductor-scisi

• bioconductor-apcomplex

• bioconductor-ygs98.db

• bioconductor-rnaseqr

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-org.sc.sgd.db

and update with:

conda update bioconductor-org.sc.sgd.db

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-org.sc.sgd.db:<tag>

(see bioconductor-org.sc.sgd.db/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-org.sc.sgd.db/README.html)