- recipe bioconductor-organismdbi
Software to enable the smooth interfacing of different database packages
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/OrganismDbi.html
- License
Artistic-2.0
- Recipe
- Links
biotools: organismdbi, doi: 10.1038/nmeth.3252
The package enables a simple unified interface to several annotation packages each of which has its own schema by taking advantage of the fact that each of these packages implements a select methods.
- package bioconductor-organismdbi¶
-
- Versions
1.36.0-0
,1.34.0-0
,1.32.0-1
,1.32.0-0
,1.30.0-0
,1.28.0-0
,1.26.0-1
,1.24.0-0
,1.22.0-0
,1.36.0-0
,1.34.0-0
,1.32.0-1
,1.32.0-0
,1.30.0-0
,1.28.0-0
,1.26.0-1
,1.24.0-0
,1.22.0-0
,1.20.0-0
,1.18.1-0
,1.14.1-0
,1.12.1-0
,1.12.0-0
- Depends
bioconductor-annotationdbi
>=1.56.0,<1.57.0
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-biocgenerics
>=0.40.0,<0.41.0
bioconductor-genomicfeatures
>=1.46.0,<1.47.0
bioconductor-genomicranges
>=1.46.0,<1.47.0
bioconductor-graph
>=1.72.0,<1.73.0
bioconductor-iranges
>=2.28.0,<2.29.0
bioconductor-rbgl
>=1.70.0,<1.71.0
bioconductor-s4vectors
>=0.32.0,<0.33.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-organismdbi
and update with:
conda update bioconductor-organismdbi
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-organismdbi:<tag>
(see bioconductor-organismdbi/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-organismdbi/README.html)