recipe bioconductor-oveseg

OVESEG-test to detect tissue/cell-specific markers

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/OVESEG.html

License:

GPL-2

Recipe:

/bioconductor-oveseg/meta.yaml

An R package for multiple-group comparison to detect tissue/cell-specific marker genes among subtypes. It provides functions to compute OVESEG-test statistics, derive component weights in the mixture null distribution model and estimate p-values from weightedly aggregated permutations. Obtained posterior probabilities of component null hypotheses can also portrait all kinds of upregulation patterns among subtypes.

package bioconductor-oveseg

(downloads) docker_bioconductor-oveseg

Versions:
1.14.0-01.10.0-21.10.0-11.10.0-01.8.0-01.6.0-11.6.0-01.4.0-01.2.0-0

1.14.0-01.10.0-21.10.0-11.10.0-01.8.0-01.6.0-11.6.0-01.4.0-01.2.0-01.0.0-1

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-oveseg

and update with:

conda update bioconductor-oveseg

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-oveseg:<tag>

(see bioconductor-oveseg/tags for valid values for <tag>)

Download stats